Ceška / Ceska / Paoletti Hybrid Systems Biology

6th International Workshop, HSB 2019, Prague, Czech Republic, April 6-7, 2019, Revised Selected Papers
Erscheinungsjahr 2019
ISBN: 978-3-030-28042-0
Verlag: Springer International Publishing
Format: PDF
Kopierschutz: 1 - PDF Watermark

E-Book, Englisch, 181 Seiten, eBook

Reihe: Lecture Notes in Bioinformatics

This book constitutes the thoroughly refereed proceedings of the 6th International Workshop on Hybrid Systems Biology, HSB 2019, held in Prague, Czech Republic, in April 2019. The 8 full papers presented in this book together with 1 short paper and 3 invited papers were carefully reviewed and selected from 13 submissions. They cover topics such as: modeling and analysis of metabolic, signaling, and genetic regulatory networks in living cells; models of tissues, organs, physiological models; models and methods coping with incomplete, uncertain and heterogeneous information including learning for biological systems, parametric synthesis and inference; stochastic and hybrid models in biology; hierarchical systems for multi-scale, multi-domain analysis; abstraction, approximation, discretization, and model reduction techniques; modeling, analysis and design for synthetic biology, cyber-biological systems and biomedical studies (e.g. therapies, teleoperation); game-theoretical frameworks and population models in biology (e.g. mixed-effects and Bayesian modeling); biological applications of quantitative and formal analysis techniques (e.g. reachability computation, model checking, abstract interpretation, bifurcation theory, stability and sensitivity analysis); efficient techniques for combined and heterogeneous (stochastic/deterministic, spatial/non-spatial) simulations for biological models; modeling languages and logics for biological systems with related analysis and simulation tools; and control architectures of biological systems including biology-in-the-loop systems and bio-robotics.

Zielgruppe

Research

Autoren/Hrsg.

Ceška, Milan

Ceska, Milan

Paoletti, Nicola

Inhaltsverzeichnis

A multimodular system to study the impact of a focal lesion in neuronal cell cultures.- Reachability analysis and hybrid systems biology - In Memoriam Oded Maler.- Reaction networks, oscillatory motifs and parameter estimation in biochemical systems.- Fixed-point computation of equilibria in biochemical regulatory networks.- Rejection-based simulation of stochastic spreading processes on complex networks.- Controlling noisy expression through auto regulation of burst frequency and protein stability.- Extracting landscape features from single particle trajectories.- A hybrid HMM approach for the dynamics of DNA methylation.- Using a hybrid approach to model central carbon metabolism across the cell cycle.- Data-informed parameter synthesis for population Markov chains-. rPrism - A software for reactive weighted state transition models.- Hybrid modeling of metabolic-regulatory networks.